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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THYM rs11713168 chr3:61832605 G/A HNRNPCL1 chr1:12907261-12908578:- 0.5 7.21 1.36E-10 Box Plot
THYM rs11734728 chr4:73623245 G/A RAB12 chr18:8609443-8639379:+ 0.67 7.38 6.08E-11 Box Plot
THYM rs11766582 chr7:107788257 C/T GPR149 chr3:154055461-154147504:- 0.79 7.17 1.64E-10 Box Plot
THYM rs11860935 chr16:30080780 C/T ZNF254 chr19:24216207-24312763:+ 0.69 7.46 4.08E-11 Box Plot
THYM rs11861842 chr16:30094180 C/T ZNF254 chr19:24216207-24312763:+ 0.66 7.11 2.12E-10 Box Plot
THYM rs11863083 chr16:30100789 T/C ZNF254 chr19:24216207-24312763:+ 0.69 7.33 7.52E-11 Box Plot
THYM rs11863129 chr16:30095492 C/T ZNF254 chr19:24216207-24312763:+ 0.66 7.11 2.12E-10 Box Plot
THYM rs11864642 chr16:30084276 C/T ZNF254 chr19:24216207-24312763:+ 0.66 7.11 2.12E-10 Box Plot
THYM rs11867026 chr16:30079450 C/T ZNF254 chr19:24216207-24312763:+ 0.66 7.11 2.12E-10 Box Plot
THYM rs11949435 chr5:176714932 C/G LOC388955 chr2:63849182-63850159:- 0.56 7.81 7.56E-12 Box Plot
THYM rs11949767 chr5:176740244 A/G LOC388955 chr2:63849182-63850159:- 0.56 8.94 3.1E-14 Box Plot
THYM rs11951059 chr5:176563698 A/G LOC388955 chr2:63849182-63850159:- -0.69 -9.96 2.03E-16 Box Plot
THYM rs11952102 chr5:176740704 G/A LOC388955 chr2:63849182-63850159:- 0.61 9.81 4.11E-16 Box Plot
THYM rs11955537 chr5:176574088 A/G LOC388955 chr2:63849182-63850159:- -0.69 -9.75 5.58E-16 Box Plot
THYM rs11957608 chr5:176655345 T/C LOC388955 chr2:63849182-63850159:- -0.69 -9.96 2.03E-16 Box Plot